/* This file is part of Magnum. Copyright © 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019 Vladimír Vondruš Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. */ #include #include #include #include "corrade/bootstrap.h" #include "corrade/PyArrayView.h" #include "corrade/PybindExtras.h" namespace corrade { namespace { struct Slice { std::size_t start; std::size_t stop; std::ptrdiff_t step; }; Slice calculateSlice(py::slice slice, std::size_t containerSize) { std::size_t size; std::ptrdiff_t start, stop, step; /* Happens for example when passing a tuple as a slice or a zero step */ if(!slice.compute(containerSize, reinterpret_cast(&start), reinterpret_cast(&stop), reinterpret_cast(&step), &size)) throw py::error_already_set{}; /* If step is negative, start > stop and we have to recalculate */ CORRADE_INTERNAL_ASSERT((start <= stop) == (step > 0)); if(step < 0) { std::swap(start, stop); start += 1; stop += 1; } return Slice{std::size_t(start), std::size_t(stop), step}; } template void arrayView(py::class_>& c) { /* Implicitly convertible from a buffer */ py::implicitly_convertible>(); c /* Constructor */ .def(py::init(), "Default constructor") /* Buffer protocol */ .def(py::init([](py::buffer buffer) { py::buffer_info info = buffer.request(!std::is_const::value); // TODO: test for items that are not 1 byte size if(info.ndim != 1) throw py::buffer_error{Utility::formatString("expected one dimension but got {}", info.ndim)}; if(info.strides[0] != 1) throw py::buffer_error{Utility::formatString("expected stride of 1 but got {}", info.strides[0])}; // TODO: need to take buffer.obj, not buffer! return PyArrayView{{static_cast(info.ptr), std::size_t(info.shape[0])}, buffer}; }), "Construct from a buffer") .def_buffer([](const PyArrayView& self) -> py::buffer_info { return py::buffer_info{ const_cast(self.data()), sizeof(T), py::format_descriptor::format(), 1, {self.size()}, {1} // TODO: need to pass self.obj to the buffer, not self! }; }) /* Length and memory owning object */ .def("__len__", &PyArrayView::size, "View size") .def_readonly("obj", &PyArrayView::obj, "Memory owner object") /* Conversion to bytes */ .def("__bytes__", [](const PyArrayView& self) { return py::bytes(self.data(), self.size()); }, "Convert to bytes") /* Single item retrieval. Need to throw IndexError in order to allow iteration: https://docs.python.org/3/reference/datamodel.html#object.__getitem__ */ .def("__getitem__", [](const PyArrayView& self, std::size_t i) { if(i >= self.size()) throw pybind11::index_error{}; return self[i]; }, "Value at given position") /* Slicing */ .def("__getitem__", [](const PyArrayView& self, py::slice slice) -> py::object { const Slice calculated = calculateSlice(slice, self.size()); /* Non-trivial stride, return a different type */ if(calculated.step != 1) { return py::cast(PyStridedArrayView<1, T>( Containers::stridedArrayView(self).slice(calculated.start, calculated.stop).every(calculated.step), self.obj)); } /* Usual business */ return py::cast(PyArrayView{self.slice(calculated.start, calculated.stop), self.obj}); }, "Slice the view"); } template void mutableArrayView(py::class_>& c) { c .def("__setitem__", [](const PyArrayView& self, std::size_t i, const T& value) { if(i >= self.size()) throw pybind11::index_error{}; self[i] = value; }, "Set a value at given position"); } /* Tuple for given dimension */ template struct DimensionsTuple; template struct DimensionsTuple<1, T> { typedef std::tuple Type; }; template struct DimensionsTuple<2, T> { typedef std::tuple Type; }; template struct DimensionsTuple<3, T> { typedef std::tuple Type; }; /* Size tuple for given dimension */ template typename DimensionsTuple::Type size(Containers::StridedDimensions); template<> std::tuple size(Containers::StridedDimensions<1, std::size_t> size) { return std::make_tuple(size[0]); } template<> std::tuple size(Containers::StridedDimensions<2, std::size_t> size) { return std::make_tuple(size[0], size[1]); } template<> std::tuple size(Containers::StridedDimensions<3, std::size_t> size) { return std::make_tuple(size[0], size[1], size[2]); } /* Stride tuple for given dimension */ template typename DimensionsTuple::Type stride(Containers::StridedDimensions); template<> std::tuple stride(Containers::StridedDimensions<1, std::ptrdiff_t> stride) { return std::make_tuple(stride[0]); } template<> std::tuple stride(Containers::StridedDimensions<2, std::ptrdiff_t> stride) { return std::make_tuple(stride[0], stride[1]); } template<> std::tuple stride(Containers::StridedDimensions<3, std::ptrdiff_t> stride) { return std::make_tuple(stride[0], stride[1], stride[2]); } /* Byte conversion for given dimension */ template Containers::Array bytes(Containers::StridedArrayView); template<> Containers::Array bytes(Containers::StridedArrayView1D view) { Containers::Array out{view.size()}; std::size_t pos = 0; for(const char i: view) out[pos++] = i; return out; } template<> Containers::Array bytes(Containers::StridedArrayView2D view) { Containers::Array out{view.size()[0]*view.size()[1]}; std::size_t pos = 0; for(Containers::StridedArrayView1D i: view) for(const char j: i) out[pos++] = j; return out; } template<> Containers::Array bytes(Containers::StridedArrayView3D view) { Containers::Array out{view.size()[0]*view.size()[1]*view.size()[2]}; std::size_t pos = 0; for(Containers::StridedArrayView2D i: view) for(Containers::StridedArrayView1D j: i) for(const char k: j) out[pos++] = k; return out; } /* Getting a runtime tuple index. Ugh. */ template const T& dimensionsTupleGet(const typename DimensionsTuple<1, T>::Type& tuple, std::size_t i) { if(i == 0) return std::get<0>(tuple); CORRADE_ASSERT_UNREACHABLE(); /* LCOV_EXCL_LINE */ } template const T& dimensionsTupleGet(const typename DimensionsTuple<2, T>::Type& tuple, std::size_t i) { if(i == 0) return std::get<0>(tuple); if(i == 1) return std::get<1>(tuple); CORRADE_ASSERT_UNREACHABLE(); /* LCOV_EXCL_LINE */ } template const T& dimensionsTupleGet(const typename DimensionsTuple<3, T>::Type& tuple, std::size_t i) { if(i == 0) return std::get<0>(tuple); if(i == 1) return std::get<1>(tuple); if(i == 2) return std::get<2>(tuple); CORRADE_ASSERT_UNREACHABLE(); /* LCOV_EXCL_LINE */ } template void stridedArrayView(py::class_>& c) { c /* Constructor */ .def(py::init(), "Default constructor") /* Buffer protocol */ .def(py::init([](py::buffer buffer) { py::buffer_info info = buffer.request(!std::is_const::value); if(info.ndim != dimensions) throw py::buffer_error{Utility::formatString("expected {} dimensions but got {}", dimensions, info.ndim)}; return PyStridedArrayView{{ {static_cast(info.ptr), std::size_t(info.size*info.strides[0])}, Containers::StaticArrayView{reinterpret_cast(&info.shape[0])}, Containers::StaticArrayView{reinterpret_cast(&info.strides[0])}}, // TODO: need to take buffer.obj, not buffer! buffer}; }), "Construct from a buffer") .def_buffer([](const PyStridedArrayView& self) -> py::buffer_info { std::vector shape(dimensions); Containers::StridedDimensions selfSize{self.size()}; for(std::size_t i = 0; i != dimensions; ++i) shape[i] = selfSize[i]; std::vector strides(dimensions); Containers::StridedDimensions selfStride{self.stride()}; for(std::size_t i = 0; i != dimensions; ++i) strides[i] = selfStride[i]; return py::buffer_info{ const_cast(self.data()), sizeof(T), py::format_descriptor::format(), dimensions, shape, strides // TODO: need to pass self.obj to the buffer, not self! }; }) // TODO: construct from a buffer + size/stride /* Length, size/stride tuple, dimension count and memory owning object */ .def("__len__", [](const PyStridedArrayView& self) { return Containers::StridedDimensions(self.size())[0]; }, "View size in the top-level dimension") .def_property_readonly("size", [](const PyStridedArrayView& self) { return size(self.size()); }, "View size in each dimension") .def_property_readonly("stride", [](const PyStridedArrayView& self) { return stride(self.stride()); }, "View stride in each dimension") .def_property_readonly("dimensions", [](const PyStridedArrayView&) { return dimensions; }, "Dimension count") .def_readonly("obj", &PyStridedArrayView::obj, "Memory owner object") /* Conversion to bytes */ .def("__bytes__", [](const PyStridedArrayView& self) { /* TODO: use _PyBytes_Resize() to avoid the double copy */ const Containers::Array out = bytes(Containers::arrayCast(self)); return py::bytes(out.data(), out.size()); }, "Convert to bytes") /* Slicing of the top dimension */ .def("__getitem__", [](const PyStridedArrayView& self, py::slice slice) -> py::object { const Slice calculated = calculateSlice(slice, Containers::StridedDimensions{self.size()}[0]); return py::cast(PyStridedArrayView(self.slice(calculated.start, calculated.stop).every(calculated.step), self.obj)); }, "Slice the view"); } template void stridedArrayView1D(py::class_>& c) { c /* Single item retrieval. Need to throw IndexError in order to allow iteration: https://docs.python.org/3/reference/datamodel.html#object.__getitem__ */ .def("__getitem__", [](const PyStridedArrayView<1, T>& self, std::size_t i) { if(i >= self.size()) throw pybind11::index_error{}; return self[i]; }, "Value at given position"); } template void stridedArrayViewND(py::class_>& c) { c /* Sub-view retrieval. Need to throw IndexError in order to allow iteration: https://docs.python.org/3/reference/datamodel.html#object.__getitem__ */ .def("__getitem__", [](const PyStridedArrayView& self, std::size_t i) { if(i >= Containers::StridedDimensions{self.size()}[0]) throw pybind11::index_error{}; return PyStridedArrayView{self[i], self.obj}; }, "Sub-view at given position") /* Single-item retrieval. Need to throw IndexError in order to allow iteration: https://docs.python.org/3/reference/datamodel.html#object.__getitem__ */ /* Multi-dimensional slicing */ .def("__getitem__", [](const PyStridedArrayView& self, const typename DimensionsTuple::Type& slice) -> py::object { Containers::StridedDimensions starts; Containers::StridedDimensions stops; Containers::StridedDimensions steps; for(std::size_t i = 0; i != dimensions; ++i) { const Slice calculated = calculateSlice(dimensionsTupleGet(slice, i), self.size()[i]); starts[i] = calculated.start; stops[i] = calculated.stop; steps[i] = calculated.step; } return py::cast(PyStridedArrayView(self.slice(starts, stops).every(steps), self.obj)); }, "Slice the view"); } template void stridedArrayView2D(py::class_>& c) { c .def("__getitem__", [](const PyStridedArrayView<2, T>& self, const std::tuple& i) { if(std::get<0>(i) >= self.size()[0] || std::get<1>(i) >= self.size()[1]) throw py::index_error{}; return self[std::get<0>(i)][std::get<1>(i)]; }, "Value at given position") .def("transposed", [](const PyStridedArrayView<2, T>& self, const std::size_t a, std::size_t b) { if((a == 0 && b == 1) || (a == 1 && b == 0)) return PyStridedArrayView<2, T>{self.template transposed<0, 1>(), self.obj}; throw py::value_error{Utility::formatString("dimensions {}, {} can't be transposed in a {}D view", a, b, 2)}; }, "Transpose two dimensions") .def("flipped", [](const PyStridedArrayView<2, T>& self, const std::size_t dimension) { if(dimension == 0) return PyStridedArrayView<2, T>{self.template flipped<0>(), self.obj}; if(dimension == 1) return PyStridedArrayView<2, T>{self.template flipped<1>(), self.obj}; throw py::value_error{Utility::formatString("dimension {} out of range for a {}D view", dimension, 2)}; }, "Flip a dimension") .def("broadcasted", [](const PyStridedArrayView<2, T>& self, const std::size_t dimension, std::size_t size) { if(dimension == 0) return PyStridedArrayView<2, T>{self.template broadcasted<0>(size), self.obj}; if(dimension == 1) return PyStridedArrayView<2, T>{self.template broadcasted<1>(size), self.obj}; throw py::value_error{Utility::formatString("dimension {} out of range for a {}D view", dimension, 2)}; }, "Broadcast a dimension"); } template void stridedArrayView3D(py::class_>& c) { c .def("__getitem__", [](const PyStridedArrayView<3, T>& self, const std::tuple& i) { if(std::get<0>(i) >= self.size()[0] || std::get<1>(i) >= self.size()[1] || std::get<2>(i) >= self.size()[2]) throw pybind11::index_error{}; return self[std::get<0>(i)][std::get<1>(i)][std::get<2>(i)]; }, "Value at given position") .def("transposed", [](const PyStridedArrayView<3, T>& self, const std::size_t a, std::size_t b) { if((a == 0 && b == 1) || (a == 1 && b == 0)) return PyStridedArrayView<3, T>{self.template transposed<0, 1>(), self.obj}; if((a == 0 && b == 2) || (a == 2 && b == 0)) return PyStridedArrayView<3, T>{self.template transposed<0, 2>(), self.obj}; if((a == 1 && b == 2) || (a == 2 && b == 1)) return PyStridedArrayView<3, T>{self.template transposed<1, 2>(), self.obj}; throw py::value_error{Utility::formatString("dimensions {}, {} can't be transposed in a {}D view", a, b, 3)}; }, "Transpose two dimensions") .def("flipped", [](const PyStridedArrayView<3, T>& self, const std::size_t dimension) { if(dimension == 0) return PyStridedArrayView<3, T>{self.template flipped<0>(), self.obj}; if(dimension == 1) return PyStridedArrayView<3, T>{self.template flipped<1>(), self.obj}; if(dimension == 2) return PyStridedArrayView<3, T>{self.template flipped<2>(), self.obj}; throw py::value_error{Utility::formatString("dimension {} out of range for a {}D view", dimension, 3)}; }, "Flip a dimension") .def("broadcasted", [](const PyStridedArrayView<3, T>& self, const std::size_t dimension, std::size_t size) { if(dimension == 0) return PyStridedArrayView<3, T>{self.template broadcasted<0>(size), self.obj}; if(dimension == 1) return PyStridedArrayView<3, T>{self.template broadcasted<1>(size), self.obj}; if(dimension == 2) return PyStridedArrayView<3, T>{self.template broadcasted<2>(size), self.obj}; throw py::value_error{Utility::formatString("dimension {} out of range for a {}D view", dimension, 3)}; }, "Broadcast a dimension"); } template void mutableStridedArrayView1D(py::class_>& c) { c .def("__setitem__", [](const PyStridedArrayView<1, T>& self, const std::size_t i, const T& value) { if(i >= self.size()) throw pybind11::index_error{}; self[i] = value; }, "Set a value at given position"); } template void mutableStridedArrayView2D(py::class_>& c) { c .def("__setitem__", [](const PyStridedArrayView<2, T>& self, const std::tuple& i, const T& value) { if(std::get<0>(i) >= self.size()[0] || std::get<1>(i) >= self.size()[1]) throw pybind11::index_error{}; self[std::get<0>(i)][std::get<1>(i)] = value; }, "Set a value at given position"); } template void mutableStridedArrayView3D(py::class_>& c) { c .def("__setitem__", [](const PyStridedArrayView<3, T>& self, const std::tuple& i, const T& value) { if(std::get<0>(i) >= self.size()[0] || std::get<1>(i) >= self.size()[1] || std::get<2>(i) >= self.size()[2]) throw pybind11::index_error{}; self[std::get<0>(i)][std::get<1>(i)][std::get<2>(i)] = value; }, "Set a value at given position"); } void containers(py::module& m) { py::class_> arrayView_{m, "ArrayView", "Array view", py::buffer_protocol{}}; arrayView(arrayView_); py::class_> mutableArrayView_{m, "MutableArrayView", "Mutable array view", py::buffer_protocol{}}; arrayView(mutableArrayView_); mutableArrayView(mutableArrayView_); py::class_> stridedArrayView1D_{m, "StridedArrayView1D", "One-dimensional array view with stride information", py::buffer_protocol{}}; py::class_> stridedArrayView2D_{m, "StridedArrayView2D", "Two-dimensional array view with stride information", py::buffer_protocol{}}; py::class_> stridedArrayView3D_{m, "StridedArrayView3D", "Three-dimensional array view with stride information", py::buffer_protocol{}}; stridedArrayView(stridedArrayView1D_); stridedArrayView1D(stridedArrayView1D_); stridedArrayView(stridedArrayView2D_); stridedArrayViewND(stridedArrayView2D_); stridedArrayView2D(stridedArrayView2D_); stridedArrayView(stridedArrayView3D_); stridedArrayViewND(stridedArrayView3D_); stridedArrayView3D(stridedArrayView3D_); py::class_> mutableStridedArrayView1D_{m, "MutableStridedArrayView1D", "Mutable one-dimensional array view with stride information", py::buffer_protocol{}}; py::class_> mutableStridedArrayView2D_{m, "MutableStridedArrayView2D", "Mutable two-dimensional array view with stride information", py::buffer_protocol{}}; py::class_> mutableStridedArrayView3D_{m, "MutableStridedArrayView3D", "Mutable three-dimensional array view with stride information", py::buffer_protocol{}}; stridedArrayView(mutableStridedArrayView1D_); stridedArrayView1D(mutableStridedArrayView1D_); stridedArrayView(mutableStridedArrayView2D_); stridedArrayViewND(mutableStridedArrayView2D_); stridedArrayView(mutableStridedArrayView3D_); stridedArrayViewND(mutableStridedArrayView3D_); mutableStridedArrayView1D(mutableStridedArrayView1D_); mutableStridedArrayView2D(mutableStridedArrayView2D_); mutableStridedArrayView3D(mutableStridedArrayView3D_); } }} PYBIND11_MODULE(containers, m) { m.doc() = "Corrade containers module"; corrade::containers(m); }